CDS

Accession Number TCMCG015C45979
gbkey CDS
Protein Id XP_027079050.1
Location join(10337997..10338622,10340421..10340499,10340641..10340697,10341151..10341206,10341622..10341847,10342388..10342474,10342579..10342653,10342758..10342841,10343615..10343679,10343760..10343952,10344082..10344170,10344946..10345060,10346098..10346139)
Gene LOC113702185
GeneID 113702185
Organism Coffea arabica

Protein

Length 597aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027223249.1
Definition RNA-binding protein 39 isoform X1 [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category A
Description linker between RRM2 and RRM3 domains in RBM39 protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13091        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003712        [VIEW IN EMBL-EBI]
GO:0003713        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005815        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0015630        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGACTTCGACGAGTACGATTATTTGGAGAAAACCGTGGAAGAAACCAACGGTCCTCCGTCCAAAACGAAGGAGACTAAGGACTCCGCCGAGAAAGAGAGAGACAAGGAGAAAGGATATCGGAGAAAAGAGCGTGGCGACGAGGACGAAGGTGATATTGACGAGGACGAAAGAGATCGGAAAAATTCCTCCAGCAAAAGGTCCCGGGGAGATGACGAAAACGGCCGAGATAGAGACCGCGAGAGGGAACGAGATAGGGATAGGGAGAAGGAGAGGAGCTCGCTGCACCGGAGTCGAGATAGGGAGAGTGAGAGGAGTTCGAGGGACAGGGATAGAGACAAGGAGAAGAGGGAGAAAGAGAGAGATAGGGATAGGGAAAGAGATAGGGAGAGGAGAGACAGAGACAAGGAGAAGGAGAGGGAGAGGGATAGGGACAGGGACAAGGAGAAGGAGAAGGACAGGGAGAGGAGGGATAGGGAAAAGGAGAAGGAAAGAGATAGGGAAATGGAGAGGTCGAAGGAAATGGAGAGGTCAAGGAGGAGCCGAAGCAGGTCCAGGCTCGATCGTGAAAGGGAGAGAGAGTTGATCAGGGAACGAGAGCGCGAGCTCGAGATGAGGGAAAGCAGGAGATTTAAAGAAAAGAAAGAAGCGGTGGAACCTGAGGCTGACCCAGAAAGGGATCAGAGAACAGTATTTGCTTACCAGATGCCCTTGAAGGCAACTGAGAGGGATGTTTACGAGTTTTTCTCAAAAGCAGGAAAGGTGAGGGATGTACGTCTTATCATGGATCGAAATTCGAGGAGATCAAAAGGAGTTGGGTACATTGAGTTCTTTGATTCCATGTCTGTGCCGATGGCAATTGCTCTATCTGGGCATCTACTTCATGGACAGCCTGTTATGGTTAAACCATCAGAGGCAGAAAAGAACCTTGTTCCATCAAATGCTTCCAGTAATTCAAGCGTTGTGGGCCCGTATGGTGCAACAGATAGGAAACTCTATGTTGGAAATTTACATTTCAACATGACTGAATTTCAGCTTAAACAGATTTTTGAAGCATTTGGGCCCGTTGAACTTGTACAGCTGCCTACTGATCCTGAGACTGGACACTGCAAAGGTTTTGGCTTTGTTCAATTTGCTCAACTAGAACATGCAAAGGCTGCGCAAGTTCTAAATGGGAAATTGGAGATTGCTGGTCGAACTATTAAGGTTTCATCTGTTACGGATCATGTTGGAGTGCAAGATTCAGGGCAGAAAACTGCCGATTTTGATGATGATGATGGGGGTGGATTGGCTTTGAATGCTCAATCAAGAGCAATGCTAATGGCAAAACTGGATCGCAGTGGGATTGCGTCAAGTGTTGCTGGTTCCCTTGGAGTACCTGCGCTTAATGGCGCAACTCCTGCACAACAATCCATAACCATGCCCATGGTTGCACCTACAGCAATGTCTGCTCCGGTACTTCCAGCACAAGTTTTAATGCCCCCAGAGCCCATTGGCAACCCAAGCGAGTGTTTACTTTTGAAGAATATGTTTGATCCTGCAACTGAGACGGATCCAGAATTTGATTTGGACATCAGGGATGATGTGCGTGAAGAATGTTCAAAGTATGGCCCGGTGAAGCATATCCTTGTGGACAAGAATAGTTCTGGTTATGTTTATTTGCGCTTTGAGAATGTGGAGGCTGCAGCACGTGCTCAACAAGCCATGCACAAGCGATGGTTTGCTCGCCGATTGATTTCAGCAATCTTCTTGCAACCATATGAATATGATGCAAAATTTAAAGGGGCTGCTTGA
Protein:  
MDFDEYDYLEKTVEETNGPPSKTKETKDSAEKERDKEKGYRRKERGDEDEGDIDEDERDRKNSSSKRSRGDDENGRDRDRERERDRDREKERSSLHRSRDRESERSSRDRDRDKEKREKERDRDRERDRERRDRDKEKERERDRDRDKEKEKDRERRDREKEKERDREMERSKEMERSRRSRSRSRLDRERERELIRERERELEMRESRRFKEKKEAVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFFDSMSVPMAIALSGHLLHGQPVMVKPSEAEKNLVPSNASSNSSVVGPYGATDRKLYVGNLHFNMTEFQLKQIFEAFGPVELVQLPTDPETGHCKGFGFVQFAQLEHAKAAQVLNGKLEIAGRTIKVSSVTDHVGVQDSGQKTADFDDDDGGGLALNAQSRAMLMAKLDRSGIASSVAGSLGVPALNGATPAQQSITMPMVAPTAMSAPVLPAQVLMPPEPIGNPSECLLLKNMFDPATETDPEFDLDIRDDVREECSKYGPVKHILVDKNSSGYVYLRFENVEAAARAQQAMHKRWFARRLISAIFLQPYEYDAKFKGAA